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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936268.1_cds_XP_016481886.1_73171
CDS Infomation

[gene=LOC107802821] [db_xref=GeneID:107802821] [protein=hydroxymethylglutaryl-CoA synthase-like] [protein_id=XP_016481886.1] [location=join(16321..16392,16888..16994,19346..19478,19979..20122,20254..20412,20779..20852,20943..21018,21113..21168,21257..21344,21509..21649,21747..21896,22051..22239)] [gbkey=CDS]
Sequence

ATGGCTTCTCAACCGAAGAATGTCGGAATTCTCGCCATGGAGATTTACTTTCCTCCTACT
TGCCTTCGGCAGGAAGTATTGGAGGCTCATGATGGAGCAAGCAAAGGCAAGTATACAATT
GGTCTTGGACAAGATTGCATGGGCTTTTGCACTGAGGTTGAAGATGTTATATCGATGAGC
TTGACAGCTGTTACTTCCCTTCTGGAGAAGTATGCTATTGATCCAAAGCAAATTGGTCGG
CTAGAGGTTGGAAGTGAAACAGTTATTGACAAGAGCAAATCCATCAAGACATTTTTAATG
CAAATATTTGAGAAACATGGGAATACTGACATTGAAGGAGTTGACTCAACTAATGCCTGT
TATGGGGGAACTGCTGCATTGTTCAACTGCGTAAATTGGGTGGAAAGCTCCTCGTGGGAT
GGCCGCTATGGACTTGTAGTATGCACAGACAGTGCGGTCTATGCAGAGGGACCTGCTCGG
CCCACTGGAGGAGCTGCAGCCATTGCTATGCTTGTGGGGCCTAATGCTCCTATAGTGTTT
GAAAGCAAGATCAGGGCTAGCCATATGTCCCATGCCTATGATTTTTACAAGCCCATCCTT
GACAGTGAATATCCAGTGGTTGATGGTAAGCTTTCACAAACCTGTTATCTCATGGCACTT
GATTCTTGCTACAAGAGTTTATGCAACAAATATGAGAAATTGGAAGGCAAGCAATTCTCA
ATGGCTGATGCAGCCTACTTTGTCTTCCATTCACCGTACAACAAGCTCGTGCAGAAGAGC
TTTGGTCGATTGCTGTTCAACGACTTTCTAAGGAATGCTAGCTTTGTTGATGAGTCTGCC
AAACAAATCCTGGCTCCCTTTGAATCCTTAACCGGTGATGAAAGCTACCAAAGCCGTGAT
CTTGAGAAGGCATCCCAGCAAGTTGCTAAACCGTTTTATGACGAGAAGGTGCAACCTACC
ACATTGATACCAAAACAAGTTGGCAACATGTACACCGCGTCTCTCTATGCTGCTTTTGCA
TCCCTCATTCACAATAAGCACAACATATTGGCTGGTCAGAGGGTAATCATGTTCTCCTAT
GGGAGTGGATTGACTGCAACAATGTTTTCACTAAAGTTTAACGAAGGTCAACATCCTTTT
AGTTTGTCAAACATCGCAAGTGTGATGAATGTTGCAGAGAAGTTGAAATCGAGACACGAG
TTCACTCCTGAAAAATTCGTCGAAATAATGAAACTAATGGAGCACAGATATGGTGCCAAG
GACTTTGTGACCAGCAAGGATTGCAGCCTTCTCGCACCAGGAACCTACTACCTAACAGAG
GTTGATTCCAAGTACAGAAGATTTTATGCACAGAAGGCTCCCGAACATGGACTGGTCAAT
GGACACTGA

Peptide Sequence

PEP ID

XP_016481886.1
PEP Infomation

PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Nicotiana tabacum]
Sequence

MASQPKNVGILAMEIYFPPTCLRQEVLEAHDGASKGKYTIGLGQDCMGFCTEVEDVISMS
LTAVTSLLEKYAIDPKQIGRLEVGSETVIDKSKSIKTFLMQIFEKHGNTDIEGVDSTNAC
YGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLVGPNAPIVF
ESKIRASHMSHAYDFYKPILDSEYPVVDGKLSQTCYLMALDSCYKSLCNKYEKLEGKQFS
MADAAYFVFHSPYNKLVQKSFGRLLFNDFLRNASFVDESAKQILAPFESLTGDESYQSRD
LEKASQQVAKPFYDEKVQPTTLIPKQVGNMYTASLYAAFASLIHNKHNILAGQRVIMFSY
GSGLTATMFSLKFNEGQHPFSLSNIASVMNVAEKLKSRHEFTPEKFVEIMKLMEHRYGAK
DFVTSKDCSLLAPGTYYLTEVDSKYRRFYAQKAPEHGLVNGH

Transcript Sequence

Gene sequence data has not been registered.